Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m23 | SAMN04488505_104210 | Not Available | Negative | 4498322 - 4499257 | 35126.1 |
| methylmalonyl-coa mutase, n-terminal domain | SAMN04488505_104211 | Not Available | Positive | 4499367 - 4500914 | 57084.1 |
| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase | SAMN04488505_104212 | Not Available | Positive | 4501103 - 4502002 | 33788.4 |
| dual-action heigh metallo-peptidase | SAMN04488505_104213 | Not Available | Negative | 4502220 - 4503044 | 29065.2 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_104214 | Not Available | Positive | 4503469 - 4506318 | 103925.0 |
| dihydrolipoamide dehydrogenase | SAMN04488505_104215 | Not Available | Negative | 4506484 - 4507890 | 50253.9 |
| chaperone lola | SAMN04488505_104216 | Not Available | Negative | 4508071 - 4508742 | 24789.8 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN04488505_104217 | Not Available | Negative | 4508844 - 4511444 | 97111.9 |
| hypothetical protein | SAMN04488505_104218 | Not Available | Negative | 4511696 - 4513129 | 52764.0 |
| uncharacterized membrane protein ygdd, tmem256/duf423 family | SAMN04488505_104219 | Not Available | Negative | 4513279 - 4513668 | 13990.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
