Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_104200 | Not Available | Negative | 4487169 - 4487891 | 24961.5 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488505_104201 | Not Available | Negative | 4487913 - 4488752 | 31616.8 |
| two component transcriptional regulator, lyttr family | SAMN04488505_104202 | Not Available | Negative | 4488847 - 4489614 | 29437.7 |
| histidine kinase | SAMN04488505_104203 | Not Available | Negative | 4489622 - 4490653 | 40316.9 |
| secd/secf fusion protein | SAMN04488505_104204 | Not Available | Negative | 4490933 - 4494142 | 117449.0 |
| beta-lactamase enzyme family protein | SAMN04488505_104205 | Not Available | Positive | 4494264 - 4495514 | 48690.1 |
| protein of unknown function | SAMN04488505_104206 | Not Available | Positive | 4495572 - 4496285 | 25617.2 |
| aspartate aminotransferase | SAMN04488505_104207 | Not Available | Positive | 4496438 - 4497631 | 43516.6 |
| hypothetical protein | SAMN04488505_104208 | Not Available | Negative | 4497559 - 4497726 | 6172.47 |
| hypothetical protein | SAMN04488505_104209 | Not Available | Positive | 4497782 - 4498303 | 19106.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
