Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN04488505_104190 | Not Available | Negative | 4476533 - 4477027 | 18291.3 |
| chaperonin groel | SAMN04488505_104191 | Not Available | Negative | 4477146 - 4478780 | 57988.7 |
| chaperonin groes | SAMN04488505_104192 | Not Available | Negative | 4478898 - 4479179 | 9829.93 |
| nusb antitermination factor | SAMN04488505_104193 | Not Available | Positive | 4479598 - 4480494 | 34597.9 |
| protein of unknown function | SAMN04488505_104194 | Not Available | Positive | 4480597 - 4481046 | 16142.1 |
| preprotein translocase subunit yajc | SAMN04488505_104195 | Not Available | Positive | 4481172 - 4481522 | 12815.9 |
| dephospho-coa kinase | SAMN04488505_104196 | Not Available | Positive | 4481804 - 4482391 | 22263.1 |
| superfamily ii dna or rna helicase, snf2 family | SAMN04488505_104197 | Not Available | Positive | 4482564 - 4485458 | 110867.0 |
| endoglucanase | SAMN04488505_104198 | Not Available | Positive | 4485521 - 4486627 | 42981.4 |
| hypothetical protein | SAMN04488505_104199 | Not Available | Negative | 4486692 - 4487108 | 15834.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
