Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad/fmn-containing dehydrogenase | SAMN04488505_101347 | Not Available | Negative | 443034 - 444512 | 54602.4 |
| hypothetical protein | SAMN04488505_101348 | Not Available | Positive | 445168 - 445590 | 16046.1 |
| hypothetical protein | SAMN04488505_101349 | Not Available | Positive | 445819 - 445989 | 6552.0 |
| Trna-pro | Not Available | Not Available | Positive | 446340 - 446417 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 446457 - 446545 | Not Available |
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN04488505_101352 | Not Available | Positive | 446693 - 448339 | 60176.0 |
| fatty acid desaturase | SAMN04488505_101353 | Not Available | Positive | 448886 - 449962 | 42137.4 |
| susd and ragb outer membrane lipoprotein | SAMN04488505_101354 | Not Available | Negative | 450057 - 451688 | 60137.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_101355 | Not Available | Negative | 451703 - 455071 | 121436.0 |
| fecr family protein | SAMN04488505_101356 | Not Available | Negative | 455253 - 456440 | 42927.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
