Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine aldolase | SAMN04488505_104180 | Not Available | Positive | 4459979 - 4460998 | 36950.6 |
| repeat domain-containing protein | SAMN04488505_104181 | Not Available | Negative | 4461469 - 4463583 | 78312.3 |
| hypothetical protein | SAMN04488505_104182 | Not Available | Negative | 4463621 - 4464745 | 41383.7 |
| valyl-trna synthetase | SAMN04488505_104183 | Not Available | Positive | 4465038 - 4467695 | 101025.0 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04488505_104184 | Not Available | Negative | 4467943 - 4469463 | 54382.9 |
| arac-type dna-binding protein | SAMN04488505_104185 | Not Available | Positive | 4469548 - 4470390 | 32530.6 |
| hypothetical protein | SAMN04488505_104186 | Not Available | Positive | 4470649 - 4471149 | 18694.4 |
| hypothetical protein | SAMN04488505_104187 | Not Available | Positive | 4471206 - 4471901 | 27016.6 |
| hypothetical protein | SAMN04488505_104188 | Not Available | Negative | 4471915 - 4474785 | 109813.0 |
| l-serine dehydratase | SAMN04488505_104189 | Not Available | Negative | 4474899 - 4476398 | 54033.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
