Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN04488505_104170 | Not Available | Positive | 4451776 - 4452615 | 32019.9 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | SAMN04488505_104171 | Not Available | Negative | 4452699 - 4453136 | 16009.4 |
| phosphopantetheine adenylyltransferase | SAMN04488505_104172 | Not Available | Negative | 4453217 - 4453705 | 18488.3 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | SAMN04488505_104173 | Not Available | Negative | 4453745 - 4454305 | 21352.5 |
| protein of unknown function | SAMN04488505_104174 | Not Available | Negative | 4454296 - 4455156 | 32462.3 |
| tetratricopeptide repeat-containing protein | SAMN04488505_104175 | Not Available | Negative | 4455302 - 4456060 | 28100.7 |
| dihydroneopterin aldolase | SAMN04488505_104176 | Not Available | Negative | 4456276 - 4456674 | 15190.7 |
| thioredoxin reductase (nadph) | SAMN04488505_104177 | Not Available | Negative | 4456758 - 4457741 | 35469.3 |
| protein of unknown function | SAMN04488505_104178 | Not Available | Negative | 4457769 - 4458641 | 31937.7 |
| rna polymerase primary sigma factor | SAMN04488505_104179 | Not Available | Negative | 4458807 - 4459664 | 32538.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
