Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | SAMN04488505_104150 | Not Available | Negative | 4432726 - 4433901 | 42623.4 |
| large subunit ribosomal protein l31 | SAMN04488505_104151 | Not Available | Negative | 4433970 - 4434263 | 11180.4 |
| hypothetical protein | SAMN04488505_104152 | Not Available | Negative | 4434341 - 4434832 | 18584.7 |
| putative auto-transporter adhesin, head gin domain | SAMN04488505_104153 | Not Available | Negative | 4434970 - 4435704 | 25936.9 |
| putative adhesin | SAMN04488505_104154 | Not Available | Negative | 4435779 - 4436861 | 39829.0 |
| hypothetical protein | SAMN04488505_104155 | Not Available | Negative | 4436845 - 4437405 | 21935.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_104156 | Not Available | Negative | 4437419 - 4438009 | 22309.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_104157 | Not Available | Negative | 4438237 - 4440705 | 91662.3 |
| hemerythrin hhe cation binding domain-containing protein | SAMN04488505_104158 | Not Available | Negative | 4441106 - 4441537 | 16687.2 |
| prolipoprotein diacylglyceryl transferase | SAMN04488505_104159 | Not Available | Negative | 4441545 - 4442708 | 43296.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
