Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_104140 | Not Available | Positive | 4422740 - 4423660 | 34100.1 |
| hypothetical protein | SAMN04488505_104141 | Not Available | Positive | 4423813 - 4424457 | 22960.4 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488505_104142 | Not Available | Positive | 4424975 - 4425844 | 34372.4 |
| hypothetical protein | SAMN04488505_104143 | Not Available | Negative | 4426065 - 4426154 | 3250.88 |
| predicted transcriptional regulator | SAMN04488505_104144 | Not Available | Positive | 4426250 - 4426642 | 14821.8 |
| signal transducer regulating beta-lactamase production, contains metallopeptidase domain | SAMN04488505_104145 | Not Available | Positive | 4426681 - 4428744 | 77717.8 |
| bleomycin hydrolase | SAMN04488505_104146 | Not Available | Positive | 4428969 - 4430090 | 41629.6 |
| acylphosphatase | SAMN04488505_104147 | Not Available | Negative | 4430172 - 4430447 | 9915.02 |
| 2'-5' rna ligase | SAMN04488505_104148 | Not Available | Negative | 4431145 - 4431750 | 23364.9 |
| triosephosphate isomerase | SAMN04488505_104149 | Not Available | Negative | 4431892 - 4432653 | 27345.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
