Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osta-like protein | SAMN04488505_104130 | Not Available | Positive | 4409624 - 4411528 | 70577.1 |
| na+:h+ antiporter, nhaa family | SAMN04488505_104131 | Not Available | Positive | 4411568 - 4412749 | 42854.6 |
| hypothetical protein | SAMN04488505_104132 | Not Available | Positive | 4412818 - 4413345 | 19106.0 |
| hypothetical protein | SAMN04488505_104133 | Not Available | Positive | 4413389 - 4413916 | 19354.1 |
| nad(p)h-hydrate epimerase | SAMN04488505_104134 | Not Available | Positive | 4414019 - 4415545 | 54879.4 |
| k(+)-stimulated pyrophosphate-energized sodium pump | SAMN04488505_104135 | Not Available | Positive | 4415686 - 4417884 | 76280.1 |
| transcriptional regulator, badm/rrf2 family | SAMN04488505_104136 | Not Available | Positive | 4418000 - 4418422 | 15150.2 |
| arac-type dna-binding protein | SAMN04488505_104137 | Not Available | Negative | 4418625 - 4419635 | 38531.2 |
| hypothetical protein | SAMN04488505_104138 | Not Available | Positive | 4419741 - 4419950 | 7868.61 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_104139 | Not Available | Positive | 4420299 - 4422674 | 89583.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
