Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_104120 | Not Available | Negative | 4398862 - 4399368 | 18758.5 |
| smi1 / knr4 family (sukh-1) | SAMN04488505_104121 | Not Available | Positive | 4399488 - 4399898 | 15663.5 |
| endonuclease/exonuclease/phosphatase family protein | SAMN04488505_104122 | Not Available | Positive | 4400088 - 4400897 | 30572.0 |
| hypothetical protein | SAMN04488505_104123 | Not Available | Positive | 4401103 - 4401780 | 24437.9 |
| Trna-arg | Not Available | Not Available | Positive | 4402306 - 4402382 | Not Available |
| uracil-dna glycosylase | SAMN04488505_104125 | Not Available | Positive | 4402546 - 4403220 | 25097.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04488505_104126 | Not Available | Positive | 4403362 - 4404117 | 29110.0 |
| hypothetical protein | SAMN04488505_104127 | Not Available | Negative | 4404149 - 4406923 | 104770.0 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04488505_104128 | Not Available | Positive | 4407193 - 4408464 | 47968.8 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04488505_104129 | Not Available | Positive | 4408629 - 4409627 | 35811.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
