Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_104110 | Not Available | Positive | 4386148 - 4387077 | 34606.9 |
| pap2 superfamily protein | SAMN04488505_104111 | Not Available | Positive | 4387067 - 4388620 | 57514.9 |
| arac-type dna-binding protein | SAMN04488505_104112 | Not Available | Positive | 4388797 - 4389693 | 33577.4 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488505_104113 | Not Available | Positive | 4389783 - 4390484 | 25874.4 |
| membrane fusion protein, multidrug efflux system | SAMN04488505_104114 | Not Available | Positive | 4390654 - 4391736 | 38505.0 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04488505_104115 | Not Available | Positive | 4391838 - 4395026 | 115235.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04488505_104116 | Not Available | Positive | 4395092 - 4396519 | 51604.7 |
| hypothetical protein | SAMN04488505_104117 | Not Available | Negative | 4396608 - 4397366 | 28494.8 |
| tpr repeat-containing protein | SAMN04488505_104118 | Not Available | Positive | 4397545 - 4398363 | 30113.8 |
| hypothetical protein | SAMN04488505_104119 | Not Available | Positive | 4398453 - 4398896 | 16366.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
