Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN04488505_104100 | Not Available | Positive | 4374436 - 4375494 | 38179.5 |
| glucose-fructose oxidoreductase | SAMN04488505_104101 | Not Available | Positive | 4375909 - 4377009 | 40685.1 |
| bifunctional non-homologous end joining protein ligd | SAMN04488505_104102 | Not Available | Positive | 4377117 - 4379231 | 79637.3 |
| hypothetical protein | SAMN04488505_104103 | Not Available | Negative | 4379235 - 4379465 | 8636.53 |
| hypothetical protein | SAMN04488505_104104 | Not Available | Positive | 4379668 - 4380072 | 15795.5 |
| adenylate kinase | SAMN04488505_104105 | Not Available | Positive | 4380224 - 4380766 | 20260.3 |
| short-chain dehydrogenase | SAMN04488505_104106 | Not Available | Positive | 4380804 - 4381784 | 34521.8 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN04488505_104107 | Not Available | Positive | 4381797 - 4383119 | 47295.7 |
| fad dependent oxidoreductase | SAMN04488505_104108 | Not Available | Negative | 4383133 - 4385139 | 73594.9 |
| dinb superfamily protein | SAMN04488505_104109 | Not Available | Negative | 4385290 - 4385817 | 20249.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
