Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, multidrug efflux system | SAMN04488505_10490 | Not Available | Negative | 4361373 - 4362554 | 41957.7 |
| transcriptional regulator, arac family | SAMN04488505_10491 | Not Available | Negative | 4362884 - 4363762 | 33374.5 |
| dna-binding transcriptional regulator, marr family | SAMN04488505_10492 | Not Available | Negative | 4363961 - 4364494 | 20622.3 |
| duplicated orphan permease | SAMN04488505_10493 | Not Available | Negative | 4364840 - 4367215 | 87977.5 |
| dna mismatch repair protein muts2 | SAMN04488505_10494 | Not Available | Negative | 4367421 - 4369529 | 81237.3 |
| hypothetical protein | SAMN04488505_10495 | Not Available | Negative | 4369526 - 4369645 | 4395.23 |
| peptide-methionine (s)-s-oxide reductase | SAMN04488505_10496 | Not Available | Positive | 4369685 - 4370335 | 24324.3 |
| hypothetical protein | SAMN04488505_10497 | Not Available | Positive | 4370550 - 4370858 | 11824.6 |
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN04488505_10498 | Not Available | Negative | 4370855 - 4371688 | 31073.3 |
| putative abc transport system permease protein | SAMN04488505_10499 | Not Available | Negative | 4371826 - 4374261 | 89953.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
