Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted alpha-1,6-mannanase, gh76 family | SAMN04488505_10480 | Not Available | Positive | 4343536 - 4345149 | 59981.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_10481 | Not Available | Positive | 4345179 - 4347737 | 92602.7 |
| arac-like ligand binding domain-containing protein | SAMN04488505_10482 | Not Available | Positive | 4347877 - 4348698 | 31349.5 |
| outer membrane protein tolc | SAMN04488505_10483 | Not Available | Positive | 4348918 - 4350291 | 50261.7 |
| multidrug efflux pump subunit acrb | SAMN04488505_10484 | Not Available | Positive | 4350299 - 4353451 | 114098.0 |
| rnd family efflux transporter, mfp subunit | SAMN04488505_10485 | Not Available | Positive | 4353477 - 4354571 | 39193.2 |
| hypothetical protein | SAMN04488505_10486 | Not Available | Negative | 4354581 - 4355618 | 38186.6 |
| Trna-ser | Not Available | Not Available | Positive | 4356248 - 4356332 | Not Available |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04488505_10488 | Not Available | Negative | 4356633 - 4358045 | 51631.9 |
| hydrophobe/amphiphile efflux-1 (hae1) family protein | SAMN04488505_10489 | Not Available | Negative | 4358133 - 4361297 | 115930.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
