Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN04488505_10470 | Not Available | Positive | 4334041 - 4335516 | 56286.6 |
| methyltransferase domain-containing protein | SAMN04488505_10471 | Not Available | Positive | 4335526 - 4336350 | 31158.6 |
| hypothetical protein | SAMN04488505_10472 | Not Available | Negative | 4336352 - 4337272 | 35856.6 |
| hypothetical protein | SAMN04488505_10473 | Not Available | Negative | 4337435 - 4338574 | 41577.0 |
| hypothetical protein | SAMN04488505_10474 | Not Available | Negative | 4338653 - 4339366 | 25125.6 |
| mfs transporter, dha1 family, tetracycline resistance protein | SAMN04488505_10475 | Not Available | Negative | 4339611 - 4340804 | 43212.6 |
| hypothetical protein | SAMN04488505_10476 | Not Available | Positive | 4340973 - 4341503 | 20007.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_10477 | Not Available | Positive | 4341591 - 4342358 | 26919.5 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_10478 | Not Available | Positive | 4342475 - 4343059 | 22895.2 |
| hypothetical protein | SAMN04488505_10479 | Not Available | Positive | 4343391 - 4343498 | 4055.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
