Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488505_10460 | Not Available | Negative | 4325943 - 4327169 | 48269.9 |
| hypothetical protein | SAMN04488505_10461 | Not Available | Positive | 4327358 - 4327558 | 7147.59 |
| protein of unknown function | SAMN04488505_10462 | Not Available | Positive | 4327548 - 4328741 | 44869.7 |
| hypothetical protein | SAMN04488505_10463 | Not Available | Positive | 4328695 - 4329171 | 17629.6 |
| hemoglobin | SAMN04488505_10464 | Not Available | Negative | 4329172 - 4329651 | 17733.1 |
| uncharacterized membrane protein | SAMN04488505_10465 | Not Available | Negative | 4329722 - 4330507 | 28487.1 |
| putative membrane protein | SAMN04488505_10466 | Not Available | Positive | 4330563 - 4330997 | 15855.9 |
| glycosyl transferases group 1 | SAMN04488505_10467 | Not Available | Positive | 4331040 - 4332116 | 40909.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_10468 | Not Available | Negative | 4332092 - 4333192 | 41346.0 |
| release factor glutamine methyltransferase | SAMN04488505_10469 | Not Available | Positive | 4333367 - 4334029 | 25456.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
