Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488505_10450 | Not Available | Positive | 4312623 - 4313360 | 27841.1 |
| two component transcriptional regulator, luxr family | SAMN04488505_10451 | Not Available | Positive | 4313532 - 4314200 | 25323.2 |
| alpha,alpha-trehalase | SAMN04488505_10452 | Not Available | Positive | 4314298 - 4315854 | 58865.6 |
| transcriptional regulator, gntr family | SAMN04488505_10453 | Not Available | Negative | 4316039 - 4317109 | 40055.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10454 | Not Available | Positive | 4317524 - 4320721 | 119357.0 |
| starch-binding associating with outer membrane | SAMN04488505_10455 | Not Available | Positive | 4320733 - 4322625 | 71237.3 |
| protein of unknown function | SAMN04488505_10456 | Not Available | Positive | 4322635 - 4323312 | 24027.0 |
| methyltransferase domain-containing protein | SAMN04488505_10457 | Not Available | Positive | 4323431 - 4324084 | 24149.3 |
| two component transcriptional regulator, lyttr family | SAMN04488505_10458 | Not Available | Negative | 4324177 - 4324884 | 26779.8 |
| histidine kinase | SAMN04488505_10459 | Not Available | Negative | 4324881 - 4325915 | 40447.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
