Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_10420 | Not Available | Negative | 4271730 - 4277357 | 190027.0 |
| hypothetical protein | SAMN04488505_10421 | Not Available | Negative | 4277324 - 4283746 | 217587.0 |
| pp_03386 | SAMN04488505_10422 | Not Available | Positive | 4284218 - 4284865 | Not Available |
| nte family protein | SAMN04488505_10423 | Not Available | Negative | 4284904 - 4287147 | 83651.8 |
| mfs transporter, mhs family, proline/betaine transporter | SAMN04488505_10424 | Not Available | Positive | 4287299 - 4288798 | 55102.0 |
| protein of unknown function | SAMN04488505_10425 | Not Available | Positive | 4289235 - 4290233 | 38100.1 |
| gscfa family protein | SAMN04488505_10426 | Not Available | Negative | 4290483 - 4291457 | 38028.4 |
| hydroxymethylglutaryl-coa lyase | SAMN04488505_10427 | Not Available | Negative | 4291493 - 4292347 | 31291.6 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN04488505_10428 | Not Available | Negative | 4292405 - 4293193 | 28285.7 |
| nudix domain-containing protein | SAMN04488505_10429 | Not Available | Negative | 4293217 - 4293777 | 21202.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
