Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | SAMN04488505_103750 | Not Available | Negative | 4243895 - 4244138 | 9182.09 |
| hypothetical protein | SAMN04488505_1041 | Not Available | Negative | 4244139 - 4244275 | 4997.36 |
| arac-type dna-binding protein | SAMN04488505_1042 | Not Available | Positive | 4244881 - 4245738 | 32904.8 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04488505_1043 | Not Available | Positive | 4245818 - 4246948 | 42214.3 |
| phosphotransferase enzyme family protein | SAMN04488505_1044 | Not Available | Positive | 4246988 - 4247974 | 36750.4 |
| surface antigen | SAMN04488505_1045 | Not Available | Negative | 4247971 - 4249200 | 46790.3 |
| sugar phosphate isomerase/epimerase | SAMN04488505_1046 | Not Available | Positive | 4249386 - 4250303 | 34318.3 |
| abc-type transport system, involved in lipoprotein release, permease component | SAMN04488505_1047 | Not Available | Positive | 4250604 - 4252964 | 87296.1 |
| nadph:quinone reductase | SAMN04488505_1048 | Not Available | Negative | 4253049 - 4253987 | 32961.6 |
| transcriptional regulator, arac family | SAMN04488505_1049 | Not Available | Positive | 4254028 - 4254921 | 35118.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
