Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para-nitrobenzyl esterase | SAMN04488505_101327 | Not Available | Negative | 426961 - 428511 | 56438.4 |
| fad/fmn-containing dehydrogenase | SAMN04488505_101328 | Not Available | Positive | 428707 - 430440 | 66056.9 |
| methyltransferase domain-containing protein | SAMN04488505_101329 | Not Available | Positive | 430447 - 431295 | 32207.8 |
| hypothetical protein | SAMN04488505_101330 | Not Available | Positive | 431343 - 432329 | 37613.1 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN04488505_101331 | Not Available | Negative | 432337 - 432918 | 21795.0 |
| predicted membrane protein | SAMN04488505_101332 | Not Available | Negative | 433064 - 433708 | 24443.2 |
| transcriptional regulator, hxlr family | SAMN04488505_101333 | Not Available | Positive | 433838 - 434209 | 13995.1 |
| transcriptional regulator, arac family | SAMN04488505_101334 | Not Available | Negative | 434251 - 435114 | 33622.9 |
| lipocalin-like domain-containing protein | SAMN04488505_101335 | Not Available | Positive | 435201 - 435680 | 17547.7 |
| peptidase s24-like | SAMN04488505_101336 | Not Available | Negative | 435789 - 436115 | 12248.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
