Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent outer membrane receptor, susc/raga subfamily, signature region | SAMN04488505_103730 | Not Available | Negative | 4221178 - 4222923 | 64427.9 |
| predicted transcriptional regulator | SAMN04488505_103731 | Not Available | Negative | 4222930 - 4223295 | 14048.8 |
| peroxiredoxin | SAMN04488505_103732 | Not Available | Negative | 4223657 - 4224784 | 41597.1 |
| peroxiredoxin | SAMN04488505_103733 | Not Available | Negative | 4224982 - 4226067 | 39699.3 |
| phosphoribosyl-atp pyrophosphatase /phosphoribosyl-amp cyclohydrolase | SAMN04488505_103734 | Not Available | Negative | 4226091 - 4226684 | 22095.5 |
| cyclase | SAMN04488505_103735 | Not Available | Negative | 4226787 - 4227542 | 27473.6 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN04488505_103736 | Not Available | Negative | 4227706 - 4228857 | 42346.3 |
| glutamine amidotransferase | SAMN04488505_103737 | Not Available | Negative | 4228861 - 4229454 | 21844.4 |
| tryptophan synthase, alpha chain | SAMN04488505_103738 | Not Available | Negative | 4229462 - 4230229 | 28184.2 |
| tryptophan synthase, beta chain | SAMN04488505_103739 | Not Available | Negative | 4230323 - 4231531 | 43745.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
