Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_103720 | Not Available | Negative | 4207470 - 4207709 | 8673.65 |
| galactose oxidase, central domain | SAMN04488505_103721 | Not Available | Negative | 4207819 - 4208829 | 36645.9 |
| protein of unknown function | SAMN04488505_103722 | Not Available | Positive | 4209075 - 4210433 | 49908.6 |
| hypothetical protein | SAMN04488505_103723 | Not Available | Positive | 4210476 - 4211714 | 45359.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_103724 | Not Available | Positive | 4211888 - 4212439 | 21356.3 |
| fecr family protein | SAMN04488505_103725 | Not Available | Positive | 4212511 - 4213506 | 37525.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_103726 | Not Available | Positive | 4213536 - 4216946 | 125055.0 |
| starch-binding associating with outer membrane | SAMN04488505_103727 | Not Available | Positive | 4216959 - 4218539 | 58610.1 |
| beta-glucosidase | SAMN04488505_103728 | Not Available | Negative | 4218640 - 4220001 | 51988.4 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04488505_103729 | Not Available | Positive | 4220078 - 4221133 | 38341.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
