Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphatase | SAMN04488505_103710 | Not Available | Negative | 4195456 - 4196034 | 22431.3 |
| methyltransferase domain-containing protein | SAMN04488505_103711 | Not Available | Negative | 4196120 - 4196863 | 28892.5 |
| phosphoglycerol transferase mdob | SAMN04488505_103712 | Not Available | Negative | 4196941 - 4198953 | 76374.4 |
| phosphomannomutase | SAMN04488505_103713 | Not Available | Positive | 4199060 - 4200604 | 56692.1 |
| cysteine desulfurase | SAMN04488505_103714 | Not Available | Positive | 4200778 - 4201905 | 41250.1 |
| hypothetical protein | SAMN04488505_103715 | Not Available | Negative | 4202032 - 4202865 | 31912.3 |
| parallel beta-helix repeat-containing protein | SAMN04488505_103716 | Not Available | Positive | 4202997 - 4204223 | 44834.6 |
| conserved hypothetical protein, hne_0200 family | SAMN04488505_103717 | Not Available | Positive | 4204223 - 4205260 | 38642.6 |
| two component transcriptional regulator, lyttr family | SAMN04488505_103718 | Not Available | Negative | 4205262 - 4205966 | 27134.9 |
| histidine kinase | SAMN04488505_103719 | Not Available | Negative | 4205959 - 4207248 | 49769.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
