Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_103680 | Not Available | Negative | 4163514 - 4165853 | 89402.1 |
| hupe / urej protein | SAMN04488505_103681 | Not Available | Negative | 4166004 - 4166597 | 21996.8 |
| hypothetical protein | SAMN04488505_103682 | Not Available | Positive | 4166666 - 4167154 | 18670.8 |
| phenylacetate-coa ligase | SAMN04488505_103683 | Not Available | Negative | 4167151 - 4168446 | 48850.0 |
| holo-[acyl-carrier-protein] synthase | SAMN04488505_103684 | Not Available | Negative | 4168449 - 4168832 | 13678.7 |
| acyl-coenzyme a:6-aminopenicillanic acid acyl-transferase | SAMN04488505_103685 | Not Available | Negative | 4168829 - 4170493 | 63099.4 |
| all-trans-retinol 13,14-reductase | SAMN04488505_103686 | Not Available | Negative | 4170557 - 4172062 | 56834.0 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferases | SAMN04488505_103687 | Not Available | Negative | 4172116 - 4175964 | 145181.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488505_103688 | Not Available | Negative | 4175957 - 4177123 | 44094.9 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN04488505_103689 | Not Available | Negative | 4177120 - 4177494 | 13731.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
