Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_103650 | Not Available | Positive | 4122190 - 4122921 | 27897.5 |
| hypothetical protein | SAMN04488505_103651 | Not Available | Positive | 4123057 - 4123587 | 19653.0 |
| lipoyl(octanoyl) transferase | SAMN04488505_103652 | Not Available | Negative | 4123598 - 4124311 | 26577.1 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN04488505_103653 | Not Available | Positive | 4124466 - 4125536 | 40986.0 |
| dna mismatch repair protein muts | SAMN04488505_103654 | Not Available | Negative | 4125979 - 4128582 | 97534.6 |
| spou rrna methylase family protein | SAMN04488505_103655 | Not Available | Positive | 4128601 - 4129359 | 27395.1 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN04488505_103656 | Not Available | Positive | 4129421 - 4130287 | 31973.1 |
| putative holliday junction resolvase | SAMN04488505_103657 | Not Available | Positive | 4130324 - 4130734 | 15226.7 |
| peptide deformylase | SAMN04488505_103658 | Not Available | Positive | 4131034 - 4131612 | 22317.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_103659 | Not Available | Positive | 4131690 - 4132238 | 21050.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
