Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | SAMN04488505_103640 | Not Available | Negative | 4109429 - 4110475 | 38252.6 |
| acetolactate synthase, small subunit | SAMN04488505_103641 | Not Available | Negative | 4110528 - 4111079 | 21315.7 |
| acetolactate synthase, large subunit | SAMN04488505_103642 | Not Available | Negative | 4111124 - 4112884 | 63639.7 |
| dihydroxyacid dehydratase | SAMN04488505_103643 | Not Available | Negative | 4112850 - 4114529 | 59679.3 |
| branched-chain amino acid aminotransferase | SAMN04488505_103644 | Not Available | Negative | 4114792 - 4115694 | 34162.9 |
| hypothetical protein | SAMN04488505_103645 | Not Available | Negative | 4115820 - 4115933 | 4227.25 |
| ser/thr protein kinase rdoa involved in cpx stress response, mazf antagonist | SAMN04488505_103646 | Not Available | Negative | 4116099 - 4117190 | 41670.8 |
| nucleotidyl transferase | SAMN04488505_103647 | Not Available | Negative | 4117181 - 4118083 | 33196.4 |
| hexosaminidase | SAMN04488505_103648 | Not Available | Positive | 4118720 - 4120981 | 83612.0 |
| 1-aminocyclopropane-1-carboxylate deaminase | SAMN04488505_103649 | Not Available | Positive | 4121098 - 4122012 | 33079.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
