Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypepd_reg-like domain-containing protein | SAMN04488505_103630 | Not Available | Negative | 4098572 - 4099324 | 28818.8 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN04488505_103631 | Not Available | Negative | 4099447 - 4099626 | 6935.25 |
| aldose 1-epimerase | SAMN04488505_103632 | Not Available | Negative | 4099680 - 4100663 | 36947.0 |
| dinb superfamily protein | SAMN04488505_103633 | Not Available | Positive | 4100707 - 4101213 | 18612.6 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04488505_103634 | Not Available | Negative | 4101208 - 4102200 | 37666.9 |
| xylulokinase | SAMN04488505_103635 | Not Available | Negative | 4102211 - 4103674 | 53096.3 |
| solute:na+ symporter, sss family | SAMN04488505_103636 | Not Available | Negative | 4103774 - 4105384 | 58612.0 |
| glycine/d-amino acid oxidase | SAMN04488505_103637 | Not Available | Negative | 4105577 - 4106737 | 42357.5 |
| nadph:quinone reductase | SAMN04488505_103638 | Not Available | Negative | 4106813 - 4107754 | 33547.3 |
| l-threonine ammonia-lyase | SAMN04488505_103639 | Not Available | Negative | 4107979 - 4109229 | 46013.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
