Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine dehydrogenase | SAMN04488505_103610 | Not Available | Positive | 4072589 - 4075453 | 104293.0 |
| hypothetical protein | SAMN04488505_103611 | Not Available | Positive | 4075670 - 4076185 | 19945.4 |
| starch-binding associating with outer membrane | SAMN04488505_103612 | Not Available | Negative | 4076365 - 4077930 | 57986.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_103613 | Not Available | Negative | 4077958 - 4081419 | 125959.0 |
| fecr family protein | SAMN04488505_103614 | Not Available | Negative | 4081679 - 4082782 | 41320.4 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488505_103615 | Not Available | Negative | 4082849 - 4083424 | 22823.5 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN04488505_103616 | Not Available | Negative | 4083497 - 4083844 | 13211.9 |
| hypothetical protein | SAMN04488505_103617 | Not Available | Positive | 4083966 - 4085858 | 72222.1 |
| protein of unknown function | SAMN04488505_103618 | Not Available | Negative | 4085933 - 4086721 | 29730.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fklb | SAMN04488505_103619 | Not Available | Positive | 4086933 - 4087652 | 25704.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
