Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate polyprenyltransferase | SAMN04488505_103600 | Not Available | Negative | 4059988 - 4060929 | 35350.9 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN04488505_103601 | Not Available | Negative | 4061022 - 4061543 | 19304.6 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN04488505_103602 | Not Available | Negative | 4061695 - 4062465 | 28209.2 |
| dna topoisomerase i | SAMN04488505_103603 | Not Available | Positive | 4062693 - 4065044 | 89329.0 |
| regulator of sirc expression, contains transglutaminase-like and tpr domains | SAMN04488505_103604 | Not Available | Positive | 4065133 - 4066005 | 34417.4 |
| acetyltransferase (gnat) family protein | SAMN04488505_103605 | Not Available | Negative | 4066077 - 4066595 | 18482.4 |
| carboxyl-terminal processing protease | SAMN04488505_103606 | Not Available | Negative | 4066683 - 4068809 | 79175.7 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488505_103607 | Not Available | Negative | 4068894 - 4070123 | 44739.1 |
| predicted arabinose efflux permease, mfs family | SAMN04488505_103608 | Not Available | Positive | 4070335 - 4071591 | 45460.0 |
| hypothetical protein | SAMN04488505_103609 | Not Available | Negative | 4071757 - 4072248 | 18996.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
