Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04488505_103589 | Not Available | Negative | 4046443 - 4049622 | 115485.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488505_103590 | Not Available | Negative | 4049676 - 4050713 | 37702.2 |
| outer membrane protein tolc | SAMN04488505_103591 | Not Available | Negative | 4050872 - 4052200 | 50736.9 |
| lipoic acid synthetase | SAMN04488505_103592 | Not Available | Negative | 4052488 - 4053384 | 33492.3 |
| hypothetical protein | SAMN04488505_103593 | Not Available | Negative | 4053505 - 4054314 | 30615.4 |
| uncharacterized osmc-related protein | SAMN04488505_103594 | Not Available | Positive | 4054536 - 4054943 | 14743.7 |
| protein of unknown function | SAMN04488505_103595 | Not Available | Negative | 4055207 - 4056505 | 50133.2 |
| cystathionine beta-lyase | SAMN04488505_103597 | Not Available | Positive | 4056880 - 4058058 | 43117.1 |
| homoserine dehydrogenase | SAMN04488505_103598 | Not Available | Positive | 4058153 - 4059334 | 44702.5 |
| septum formation protein | SAMN04488505_103599 | Not Available | Negative | 4059395 - 4059988 | 21706.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
