Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase, small subunit | SAMN04488505_103569 | Not Available | Negative | 4024727 - 4025326 | 22600.8 |
| methyltransferase domain-containing protein | SAMN04488505_103570 | Not Available | Negative | 4025331 - 4026077 | 27784.8 |
| 3-isopropylmalate dehydratase, large subunit | SAMN04488505_103571 | Not Available | Negative | 4026097 - 4027494 | 50658.2 |
| hypothetical protein | SAMN04488505_103572 | Not Available | Positive | 4027742 - 4029295 | 61759.0 |
| nad(p)h-dependent fmn reductase | SAMN04488505_103573 | Not Available | Positive | 4029349 - 4029912 | 20521.7 |
| hypothetical protein | SAMN04488505_103574 | Not Available | Negative | 4030089 - 4031198 | 42919.8 |
| abc-2 type transport system atp-binding protein | SAMN04488505_103575 | Not Available | Negative | 4031361 - 4032002 | 23719.9 |
| ribonucleoside-diphosphate reductase beta chain | SAMN04488505_103576 | Not Available | Positive | 4032454 - 4033425 | 37223.5 |
| ribonucleoside-diphosphate reductase alpha chain | SAMN04488505_103577 | Not Available | Positive | 4033504 - 4035885 | 88927.2 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04488505_103578 | Not Available | Negative | 4035959 - 4036348 | 14515.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
