Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose dehydrogenase | SAMN04488505_103559 | Not Available | Negative | 4014016 - 4014795 | 27251.8 |
| l-fuconolactonase | SAMN04488505_103560 | Not Available | Negative | 4014843 - 4015673 | 31367.6 |
| l-rhamnose mutarotase | SAMN04488505_103561 | Not Available | Negative | 4015753 - 4016088 | 13000.8 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN04488505_103562 | Not Available | Negative | 4016124 - 4016975 | 30982.8 |
| hypothetical protein | SAMN04488505_103563 | Not Available | Negative | 4017088 - 4017840 | 27395.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_103564 | Not Available | Negative | 4017875 - 4018657 | 27751.4 |
| d-alanyl-d-alanine dipeptidase | SAMN04488505_103565 | Not Available | Positive | 4018770 - 4019474 | 26874.2 |
| pyruvate dehydrogenase (quinone) | SAMN04488505_103566 | Not Available | Positive | 4019999 - 4021732 | 62294.6 |
| 2-isopropylmalate synthase | SAMN04488505_103567 | Not Available | Negative | 4021842 - 4023350 | 55089.6 |
| 3-isopropylmalate dehydrogenase | SAMN04488505_103568 | Not Available | Negative | 4023564 - 4024643 | 39528.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
