Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chad domain-containing protein | SAMN04488505_103539 | Not Available | Positive | 3987807 - 3988628 | 31589.5 |
| duplicated orphan permease | SAMN04488505_103540 | Not Available | Negative | 3988634 - 3991060 | 89064.3 |
| formiminoglutamase | SAMN04488505_103541 | Not Available | Negative | 3991289 - 3992284 | 35892.1 |
| imidazolonepropionase | SAMN04488505_103542 | Not Available | Negative | 3992296 - 3993522 | 43572.8 |
| urocanate hydratase | SAMN04488505_103543 | Not Available | Negative | 3993552 - 3995225 | 60992.9 |
| histidine ammonia-lyase | SAMN04488505_103544 | Not Available | Negative | 3995203 - 3996771 | 56804.8 |
| dna-binding transcriptional regulator, marr family | SAMN04488505_103545 | Not Available | Negative | 3996786 - 3997289 | 18756.9 |
| hypothetical protein | SAMN04488505_103546 | Not Available | Negative | 3997527 - 3997916 | 14971.8 |
| putative membrane protein | SAMN04488505_103547 | Not Available | Positive | 3998050 - 3998919 | 33369.8 |
| magnesium transporter | SAMN04488505_103548 | Not Available | Positive | 3998980 - 4000356 | 51091.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
