Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_103509 | Not Available | Negative | 3951175 - 3957258 | 213521.0 |
| adenosylhomocysteinase | SAMN04488505_103510 | Not Available | Positive | 3957744 - 3959072 | 48671.6 |
| pyridoxine 5'-phosphate synthase | SAMN04488505_103511 | Not Available | Positive | 3959197 - 3959928 | 27359.8 |
| hypothetical protein | SAMN04488505_103512 | Not Available | Negative | 3960091 - 3961149 | 39169.8 |
| atp-dependent lon protease | SAMN04488505_103513 | Not Available | Negative | 3961398 - 3963800 | 89588.5 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488505_103514 | Not Available | Negative | 3964049 - 3964672 | 22117.6 |
| hypothetical protein | SAMN04488505_103515 | Not Available | Negative | 3964850 - 3965773 | 35135.7 |
| hypothetical protein | SAMN04488505_103516 | Not Available | Negative | 3965884 - 3967149 | 47784.6 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04488505_103517 | Not Available | Positive | 3967420 - 3968112 | 25094.8 |
| chromosome segregation atpase | SAMN04488505_103518 | Not Available | Positive | 3968218 - 3969039 | 29966.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
