Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_103499 | Not Available | Positive | 3941211 - 3941453 | 9190.26 |
| regulator of sigma e protease | SAMN04488505_103500 | Not Available | Negative | 3941454 - 3942803 | 51105.9 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN04488505_103501 | Not Available | Negative | 3942915 - 3944081 | 42412.7 |
| gh3 auxin-responsive promoter | SAMN04488505_103502 | Not Available | Negative | 3944149 - 3945642 | 56419.6 |
| lsu ribosomal protein l21p | SAMN04488505_103503 | Not Available | Positive | 3946116 - 3946418 | 11142.7 |
| large subunit ribosomal protein l27 | SAMN04488505_103504 | Not Available | Positive | 3946448 - 3946714 | 9379.21 |
| hypothetical protein | SAMN04488505_103505 | Not Available | Positive | 3946792 - 3947136 | 11301.5 |
| dna polymerase (family 10) | SAMN04488505_103506 | Not Available | Positive | 3947510 - 3949195 | 62703.4 |
| ribosomal protein s18 acetylase rimi | SAMN04488505_103507 | Not Available | Positive | 3949334 - 3949831 | 18881.9 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488505_103508 | Not Available | Negative | 3950231 - 3951151 | 34498.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
