Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_103489 | Not Available | Positive | 3919529 - 3925489 | 219805.0 |
| rhs repeat-associated core domain-containing protein | SAMN04488505_103490 | Not Available | Positive | 3925510 - 3932613 | 266749.0 |
| hypothetical protein | SAMN04488505_103491 | Not Available | Positive | 3932802 - 3933473 | 25589.7 |
| transposase inso and inactivated derivatives | SAMN04488505_103492 | Not Available | Positive | 3933777 - 3935330 | 60985.6 |
| protein of unknown function | SAMN04488505_103493 | Not Available | Negative | 3935548 - 3936867 | 50719.6 |
| hypothetical protein | SAMN04488505_103494 | Not Available | Positive | 3937193 - 3938449 | 47781.6 |
| rlob-like protein | SAMN04488505_103495 | Not Available | Positive | 3938455 - 3939201 | 28477.5 |
| site-specific recombinase xerd | SAMN04488505_103496 | Not Available | Negative | 3939244 - 3940203 | 36764.9 |
| hypothetical protein | SAMN04488505_103497 | Not Available | Negative | 3940311 - 3940526 | 8283.15 |
| Tmrna,resume consensus sequence (at 90): tttaattggcgaatctaa | Not Available | Not Available | Positive | 3940737 - 3941106 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
