Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN04488505_103459 | Not Available | Positive | 3881777 - 3882535 | 28282.3 |
| hypothetical protein | SAMN04488505_103460 | Not Available | Negative | 3882532 - 3882699 | 5757.26 |
| sugar phosphate permease | SAMN04488505_103461 | Not Available | Negative | 3882696 - 3883754 | 38612.8 |
| kelch motif-containing protein | SAMN04488505_103462 | Not Available | Negative | 3883792 - 3884859 | 37707.4 |
| n-acetylneuraminate lyase | SAMN04488505_103463 | Not Available | Negative | 3884934 - 3885857 | 33554.1 |
| sialidase-1 | SAMN04488505_103464 | Not Available | Negative | 3885869 - 3887023 | 42333.4 |
| starch-binding associating with outer membrane | SAMN04488505_103465 | Not Available | Negative | 3887037 - 3888482 | 52940.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_103466 | Not Available | Negative | 3888538 - 3891888 | 123203.0 |
| a/g-specific dna-adenine glycosylase | SAMN04488505_103467 | Not Available | Negative | 3891952 - 3893190 | 45460.0 |
| dna-binding transcriptional regulator, fadr family | SAMN04488505_103468 | Not Available | Negative | 3893807 - 3894496 | 26173.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
