Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_103449 | Not Available | Positive | 3868140 - 3868346 | 7480.02 |
| hypothetical protein | SAMN04488505_103450 | Not Available | Positive | 3868348 - 3869070 | 28444.8 |
| hypothetical protein | SAMN04488505_103451 | Not Available | Positive | 3869081 - 3869641 | 21273.7 |
| membrane protease subunit, stomatin/prohibitin family, contains c-terminal zn-ribbon domain | SAMN04488505_103452 | Not Available | Positive | 3869643 - 3870620 | 36961.0 |
| predicted oxidoreductase | SAMN04488505_103453 | Not Available | Negative | 3870615 - 3871631 | 37252.9 |
| arac-type dna-binding protein | SAMN04488505_103454 | Not Available | Negative | 3871719 - 3872588 | 33007.7 |
| beta-xylosidase, gh43 family | SAMN04488505_103455 | Not Available | Negative | 3872673 - 3873734 | 38681.4 |
| starch-binding associating with outer membrane | SAMN04488505_103456 | Not Available | Negative | 3873750 - 3875309 | 58745.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_103457 | Not Available | Negative | 3875329 - 3878499 | 114642.0 |
| signal transduction histidine kinase | SAMN04488505_103458 | Not Available | Positive | 3878635 - 3881805 | 120546.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
