Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iaa-amino acid hydrolase | SAMN04488505_103439 | Not Available | Negative | 3855720 - 3856889 | 42382.0 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN04488505_103440 | Not Available | Negative | 3856942 - 3857727 | 29162.7 |
| hypothetical protein | SAMN04488505_103441 | Not Available | Positive | 3857964 - 3859925 | 74100.1 |
| atp-binding cassette, subfamily b | SAMN04488505_103442 | Not Available | Positive | 3859975 - 3861732 | 66014.0 |
| hypothetical protein | SAMN04488505_103443 | Not Available | Negative | 3861736 - 3862476 | 28713.9 |
| hypothetical protein | SAMN04488505_103444 | Not Available | Negative | 3862640 - 3863890 | 47788.6 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_103445 | Not Available | Positive | 3863929 - 3864510 | 22835.4 |
| uncharacterized membrane protein | SAMN04488505_103446 | Not Available | Positive | 3864575 - 3865048 | 17584.4 |
| hypothetical protein | SAMN04488505_103447 | Not Available | Negative | 3865109 - 3866350 | 46878.2 |
| glycosyl hydrolases family 43 | SAMN04488505_103448 | Not Available | Positive | 3866556 - 3867953 | 51584.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
