Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, sp family, arabinose:h+ symporter | SAMN04488505_103429 | Not Available | Positive | 3845021 - 3846310 | 46663.1 |
| glucokinase | SAMN04488505_103430 | Not Available | Positive | 3846289 - 3847170 | 31382.9 |
| ankyrin repeat-containing protein | SAMN04488505_103431 | Not Available | Positive | 3847326 - 3848195 | 31216.4 |
| winged helix dna-binding domain-containing protein | SAMN04488505_103432 | Not Available | Positive | 3848264 - 3849334 | 40201.9 |
| phospholipase c | SAMN04488505_103433 | Not Available | Negative | 3849397 - 3851937 | 95196.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_103434 | Not Available | Negative | 3852112 - 3852888 | 27177.5 |
| dual-action heigh metallo-peptidase | SAMN04488505_103435 | Not Available | Positive | 3853032 - 3854255 | 42277.4 |
| hypothetical protein | SAMN04488505_103436 | Not Available | Negative | 3854228 - 3854380 | 5791.17 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_103437 | Not Available | Negative | 3854450 - 3855049 | 23696.3 |
| hypothetical protein | SAMN04488505_103438 | Not Available | Negative | 3855065 - 3855568 | 17795.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
