Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, badm/rrf2 family | SAMN04488505_103419 | Not Available | Positive | 3828445 - 3828876 | 15959.6 |
| hemoglobin | SAMN04488505_103420 | Not Available | Positive | 3828938 - 3829300 | 13986.1 |
| nitric oxide reductase, norz apoprotein | SAMN04488505_103421 | Not Available | Positive | 3829337 - 3831577 | 83533.7 |
| acetyl esterase/lipase | SAMN04488505_103422 | Not Available | Positive | 3831732 - 3832610 | 32187.5 |
| transcriptional regulator, gntr family | SAMN04488505_103423 | Not Available | Negative | 3832788 - 3833519 | 27947.7 |
| hypothetical protein | SAMN04488505_103424 | Not Available | Positive | 3833730 - 3835079 | 50721.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_103425 | Not Available | Positive | 3835472 - 3838543 | 113573.0 |
| starch-binding associating with outer membrane | SAMN04488505_103426 | Not Available | Positive | 3838608 - 3840113 | 55715.9 |
| glycosyl hydrolases family 38 n-terminal domain-containing protein | SAMN04488505_103427 | Not Available | Positive | 3840269 - 3843151 | 106257.0 |
| mannose-6-phosphate isomerase, class i | SAMN04488505_103428 | Not Available | Positive | 3843204 - 3845024 | 68719.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
