Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | SAMN04488505_103399 | Not Available | Negative | 3803910 - 3804431 | 19684.8 |
| thymidylate synthase | SAMN04488505_103400 | Not Available | Negative | 3804692 - 3805486 | 30130.2 |
| hypothetical protein | SAMN04488505_103401 | Not Available | Negative | 3805510 - 3805923 | 15532.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_103402 | Not Available | Positive | 3806214 - 3809234 | 108303.0 |
| ragb/susd domain-containing protein | SAMN04488505_103403 | Not Available | Positive | 3809255 - 3810553 | 47833.7 |
| l-proline dehydrogenase | SAMN04488505_103404 | Not Available | Negative | 3810855 - 3812033 | 44649.8 |
| fecr family protein | SAMN04488505_103405 | Not Available | Positive | 3812108 - 3812893 | 29131.2 |
| xylose isomerase-like tim barrel | SAMN04488505_103406 | Not Available | Negative | 3812973 - 3814010 | 37914.0 |
| hypothetical protein | SAMN04488505_103407 | Not Available | Positive | 3814136 - 3814570 | 16238.4 |
| alpha/beta hydrolase family protein | SAMN04488505_103408 | Not Available | Negative | 3814727 - 3815596 | 33124.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
