Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_103389 | Not Available | Negative | 3788180 - 3788827 | 25405.8 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN04488505_103390 | Not Available | Negative | 3788895 - 3790079 | 43952.3 |
| serine o-acetyltransferase | SAMN04488505_103391 | Not Available | Positive | 3790381 - 3791190 | 29502.7 |
| cysteine synthase b | SAMN04488505_103392 | Not Available | Positive | 3791264 - 3792145 | 32097.8 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN04488505_103393 | Not Available | Negative | 3792239 - 3793222 | 36415.2 |
| hypothetical protein | SAMN04488505_103394 | Not Available | Positive | 3793388 - 3794017 | 23671.3 |
| acetyl-coa c-acetyltransferase | SAMN04488505_103395 | Not Available | Negative | 3794260 - 3795432 | 40899.2 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_103396 | Not Available | Negative | 3795558 - 3800717 | 186729.0 |
| pkd domain-containing protein | SAMN04488505_103397 | Not Available | Negative | 3800891 - 3801697 | 29812.4 |
| dna primase | SAMN04488505_103398 | Not Available | Positive | 3801846 - 3803828 | 75957.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
