Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methane oxygenase pmoa | SAMN04488505_103379 | Not Available | Negative | 3776220 - 3777479 | 47497.7 |
| hypothetical protein | SAMN04488505_103380 | Not Available | Positive | 3777610 - 3777879 | 9857.2 |
| l-alanine-dl-glutamate epimerase | SAMN04488505_103381 | Not Available | Negative | 3777963 - 3778982 | 37872.9 |
| molecular chaperone dnak | SAMN04488505_103382 | Not Available | Negative | 3779200 - 3781107 | 69084.9 |
| ompa-ompf porin, oop family | SAMN04488505_103383 | Not Available | Positive | 3781306 - 3782670 | 49110.1 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488505_103384 | Not Available | Positive | 3782915 - 3783454 | 19331.1 |
| arginyl-trna synthetase | SAMN04488505_103385 | Not Available | Positive | 3783611 - 3785599 | 75819.6 |
| tetratricopeptide repeat-containing protein | SAMN04488505_103386 | Not Available | Negative | 3785775 - 3786269 | 18798.9 |
| cytidine deaminase | SAMN04488505_103387 | Not Available | Negative | 3786327 - 3786809 | 17310.5 |
| signal peptidase i | SAMN04488505_103388 | Not Available | Negative | 3786921 - 3788090 | 44716.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
