Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_103369 | Not Available | Negative | 3764495 - 3765874 | 52408.5 |
| hypothetical protein | SAMN04488505_103370 | Not Available | Negative | 3766008 - 3766457 | 16533.9 |
| atp-dependent clp protease atp-binding subunit clpa | SAMN04488505_103371 | Not Available | Negative | 3766704 - 3769169 | 91885.4 |
| hypothetical protein | SAMN04488505_103372 | Not Available | Positive | 3770049 - 3770438 | 14449.0 |
| lysozyme family protein | SAMN04488505_103373 | Not Available | Positive | 3770513 - 3771253 | 28380.8 |
| hypothetical protein | SAMN04488505_103374 | Not Available | Positive | 3771278 - 3771853 | 20313.1 |
| rhs element vgr protein | SAMN04488505_103375 | Not Available | Positive | 3771902 - 3773755 | 66934.2 |
| hypothetical protein | SAMN04488505_103376 | Not Available | Positive | 3773757 - 3775136 | 53382.5 |
| peroxiredoxin | SAMN04488505_103377 | Not Available | Positive | 3775263 - 3775871 | 22598.9 |
| hypothetical protein | SAMN04488505_103378 | Not Available | Positive | 3775941 - 3776210 | 9689.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
