Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_103359 | Not Available | Negative | 3754303 - 3754692 | 14665.1 |
| hypothetical protein | SAMN04488505_103360 | Not Available | Negative | 3754873 - 3755394 | 20060.9 |
| hypothetical protein | SAMN04488505_103361 | Not Available | Negative | 3755474 - 3756649 | 45348.5 |
| hypothetical protein | SAMN04488505_103362 | Not Available | Negative | 3756696 - 3757550 | 33312.1 |
| type vi secretion, vasb, imph, vc_a0111 | SAMN04488505_103363 | Not Available | Negative | 3757691 - 3758644 | 36679.0 |
| hypothetical protein | SAMN04488505_103364 | Not Available | Positive | 3758860 - 3759933 | 39643.2 |
| phage baseplate assembly protein w | SAMN04488505_103365 | Not Available | Positive | 3760021 - 3760452 | 16332.5 |
| hypothetical protein | SAMN04488505_103366 | Not Available | Positive | 3760476 - 3762308 | 70295.1 |
| protein of unknown function | SAMN04488505_103367 | Not Available | Negative | 3762314 - 3763351 | 38372.3 |
| protein of unknown function | SAMN04488505_103368 | Not Available | Negative | 3763484 - 3764467 | 35838.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
