Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_103339 | Not Available | Positive | 3729827 - 3730444 | 23662.5 |
| hypothetical protein | SAMN04488505_103340 | Not Available | Negative | 3730494 - 3731213 | 28437.4 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN04488505_103341 | Not Available | Positive | 3731463 - 3731792 | 11979.9 |
| hypothetical protein | SAMN04488505_103342 | Not Available | Negative | 3731794 - 3731949 | 6012.37 |
| two component transcriptional regulator, luxr family | SAMN04488505_103343 | Not Available | Negative | 3732171 - 3732812 | 24567.0 |
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | SAMN04488505_103344 | Not Available | Negative | 3733206 - 3734588 | 50070.1 |
| nicotinamide-nucleotide amidase | SAMN04488505_103345 | Not Available | Negative | 3734697 - 3735986 | 46795.0 |
| acyl-coa thioester hydrolase | SAMN04488505_103346 | Not Available | Negative | 3736908 - 3737321 | 16150.5 |
| putative oxidoreductase | SAMN04488505_103347 | Not Available | Negative | 3737492 - 3737899 | 14804.8 |
| tola-binding protein | SAMN04488505_103348 | Not Available | Positive | 3738188 - 3741265 | 116482.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
