Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacillithiol system protein ytxj | SAMN04488505_103329 | Not Available | Negative | 3719531 - 3719863 | 12522.8 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | SAMN04488505_103330 | Not Available | Positive | 3720208 - 3721560 | 50492.9 |
| dna polymerase-3 subunit epsilon | SAMN04488505_103331 | Not Available | Positive | 3721658 - 3722431 | 29666.6 |
| dolichol-phosphate mannosyltransferase | SAMN04488505_103332 | Not Available | Positive | 3722505 - 3723248 | 28272.1 |
| threonine/homoserine efflux transporter rhta | SAMN04488505_103333 | Not Available | Positive | 3723313 - 3724221 | 34693.6 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488505_103334 | Not Available | Positive | 3724306 - 3727131 | 106915.0 |
| helix-turn-helix domain-containing protein | SAMN04488505_103335 | Not Available | Positive | 3727374 - 3728222 | 31781.1 |
| acetyltransferase (gnat) domain-containing protein | SAMN04488505_103336 | Not Available | Positive | 3728404 - 3728841 | 16847.2 |
| hypothetical protein | SAMN04488505_103337 | Not Available | Positive | 3728999 - 3729517 | 19667.3 |
| hypothetical protein | SAMN04488505_103338 | Not Available | Negative | 3729611 - 3729724 | 4485.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
