Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_103319 | Not Available | Positive | 3709914 - 3710369 | 16736.0 |
| propionyl-coa carboxylase beta chain | SAMN04488505_103320 | Not Available | Positive | 3710514 - 3712052 | 55798.0 |
| ubia prenyltransferase family protein | SAMN04488505_103321 | Not Available | Positive | 3712146 - 3712982 | 32075.9 |
| putative aminopeptidase frvx | SAMN04488505_103322 | Not Available | Positive | 3713101 - 3714201 | 41064.4 |
| biotin synthase | SAMN04488505_103323 | Not Available | Positive | 3714355 - 3715347 | 37105.6 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488505_103324 | Not Available | Negative | 3715510 - 3716406 | 31208.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_103325 | Not Available | Positive | 3716605 - 3717213 | 23661.2 |
| 3-dehydroquinate dehydratase | SAMN04488505_103326 | Not Available | Negative | 3717273 - 3717689 | 15191.2 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN04488505_103327 | Not Available | Negative | 3717899 - 3718462 | 20471.6 |
| glutathione peroxidase | SAMN04488505_103328 | Not Available | Positive | 3718568 - 3719152 | 21648.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
