Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination factor nusg | SAMN04488505_103309 | Not Available | Negative | 3697526 - 3698083 | 21600.1 |
| capsular exopolysaccharide family | SAMN04488505_103310 | Not Available | Negative | 3698382 - 3700796 | 89182.3 |
| polysaccharide export outer membrane protein | SAMN04488505_103311 | Not Available | Negative | 3700892 - 3701698 | 29505.0 |
| two component transcriptional regulator, luxr family | SAMN04488505_103312 | Not Available | Negative | 3701925 - 3702611 | 26014.9 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488505_103313 | Not Available | Positive | 3703147 - 3704241 | 41155.9 |
| response regulator receiver domain-containing protein | SAMN04488505_103314 | Not Available | Positive | 3704238 - 3704603 | 13694.9 |
| homoserine o-acetyltransferase | SAMN04488505_103315 | Not Available | Positive | 3704657 - 3705730 | 39389.3 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_103316 | Not Available | Negative | 3705778 - 3707463 | 60385.8 |
| hypothetical protein | SAMN04488505_103317 | Not Available | Negative | 3707818 - 3708720 | 33088.4 |
| hypothetical protein | SAMN04488505_103318 | Not Available | Negative | 3708831 - 3709814 | 37019.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
